Hey Mike,
I accidently hit 'Auto Reorder' on an unsaved ZTL the other day and after trying to re-sort 65 SubTools I wrote another Zplugin.
This one has a sorting function that will sort any visible SubTools to the bottom of the SubTool list. It also has the option to rename the tools (the rename is still a
slow function b/c it has to export out a *.dat file and import it back in to rename the Subtool.) Finally I also added the option to rename and sort as well.
Anyhow it may be of some use; i'll probably post the tool it's own thread in the coming days.
-Joseph